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Toil is a scalable, efficient, cross-platform (Linux & macOS) pipeline
management system, written entirely in Python, and designed around the
principles of functional programming. It supports running workflows
written in either Common Workflow Language
(CWL) or Workflow Description Language
(WDL), as well as having its own rich Python API
for writing workflows against. It supports running workflows locally on
your system (e.g. a laptop), on an HPC cluster, or in the cloud.
- Check the website for a description of
Toil and its features. - Full documentation for the latest stable release can be found at
Read the Docs. - Please subscribe to low-volume
announce
mailing list so we keep you informed - Google Groups discussion
forum - See our occasional blog for
tutorials. - Use biostars channel for
discussion.
Notes:
- Toil moved from https://github.com/BD2KGenomics/toil to
https://github.com/DataBiosphere/toil on July 5th, 2018. - Toil dropped Python 2.7 support on February 13, 2020 (the last
working py2.7 version is 3.24.0).