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sqlitebiter

A CLI tool to convert CSV / Excel / HTML / JSON / Jupyter Notebook / LDJSON / LTSV / Markdown / SQLite / SSV / TSV / Google-Sheets to a SQLite database file.

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Summary

sqlitebiter <https://github.com/thombashi/sqlitebiter>__ is a CLI tool to convert CSV / Excel / HTML / JSON / Jupyter Notebook / LDJSON / LTSV / Markdown / SQLite / SSV / TSV / Google-Sheets to a SQLite database file.

.. image:: https://badge.fury.io/py/sqlitebiter.svg
:target: https://badge.fury.io/py/sqlitebiter
:alt: PyPI package version

.. image:: https://img.shields.io/pypi/pyversions/sqlitebiter.svg
:target: https://pypi.org/project/sqlitebiter
:alt: Supported Python versions

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:target: https://travis-ci.org/thombashi/sqlitebiter
:alt: Linux/macOS CI status

.. image:: https://img.shields.io/appveyor/ci/thombashi/sqlitebiter/master.svg?label=Windows%20CI
:target: https://ci.appveyor.com/project/thombashi/sqlitebiter
:alt: Windows CI status

.. image:: https://build.snapcraft.io/badge/thombashi/sqlitebiter.svg
:target: https://build.snapcraft.io/user/thombashi/sqlitebiter
:alt: Snap Status

.. image:: https://img.shields.io/github/stars/thombashi/sqlitebiter.svg?style=social&label=Star
:target: https://github.com/thombashi/sqlitebiter
:alt: GitHub stars

Features

  • Create a SQLite database file from:
    • File(s):
      • CSV / Tab separated values (TSV) / Space separated values (SSV)
      • Microsoft Excel :superscript:TM
      • HTML
      • JSON
      • Jupyter Notebook <https://jupyter.org/>__
      • Labeled Tab-separated Values (LTSV) <http://ltsv.org/>__
      • Line-delimited JSON(LDJSON) <https://en.wikipedia.org/wiki/JSON_streaming#Line-delimited_JSON>__ / NDJSON / JSON Lines
      • Markdown
      • Mediawiki
      • SQLite
    • Google Sheets <https://www.google.com/intl/en_us/sheets/about/>_
    • URL (scrape tabular data from web pages)
  • Multi-byte character support
  • Automatic file encoding detection

Usage

Create SQLite database from files

.. image:: https://cdn.jsdelivr.net/gh/thombashi/sqlitebiter@master/docs/svg/usage_example.svg

Create SQLite database from URL

Following is an example that converts HTML table tags within a web page to SQLite tables by the web page URL.

:Example:
.. code-block:: console

    $ sqlitebiter url "https://en.wikipedia.org/wiki/Comparison_of_firewalls"
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html1' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html2' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html3' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html4' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html5' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html6' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html7' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html8' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html9' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html10' table
    [INFO] sqlitebiter url: convert 'Comparison_of_firewalls' to 'Comparison_of_firewalls_Wikipedia_html11' table
    [INFO] sqlitebiter url: converted results: source=1, success=11, created-table=11
    [INFO] sqlitebiter url: database path: out.sqlite

:Output:
.. code-block:: sql

    $ sqlite3 out.sqlite .schema
    CREATE TABLE IF NOT EXISTS '_source_info_' ("source_id" INTEGER NOT NULL, "dir_name" TEXT, "base_name" TEXT NOT NULL, "format_name" TEXT NOT NULL, "dst_table" TEXT NOT NULL, size INTEGER, mtime INTEGER);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html1' (Firewall TEXT, License TEXT, [Cost and usage limits] TEXT, OS TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html2' (Firewall TEXT, License TEXT, Cost TEXT, OS TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html3' ([Can Target:] TEXT, [Changing default policy to accept/reject (by issuing a single rule)] TEXT, [IP destination address(es)] TEXT, [IP source address(es)] TEXT, [TCP/UDP destination port(s)] TEXT, [TCP/UDP source port(s)] TEXT, [Ethernet MAC destination address] TEXT, [Ethernet MAC source address] TEXT, [Inbound firewall (ingress)] TEXT, [Outbound firewall (egress)] TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html4' ([Can:] TEXT, [work at OSI Layer 4 (stateful firewall)] TEXT, [work at OSI Layer 7 (application inspection)] TEXT, [Change TTL? (Transparent to traceroute)] TEXT, [Configure REJECT-with answer] TEXT, [DMZ (de-militarized zone) - allows for single/several hosts not to be firewalled.] TEXT, [Filter according to time of day] TEXT, [Redirect TCP/UDP ports (port forwarding)] TEXT, [Redirect IP addresses (forwarding)] TEXT, [Filter according to User Authorization] TEXT, [Traffic rate-limit / QoS] TEXT, Tarpit TEXT, Log TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html5' ([Features:] TEXT, "Configuration: GUI_ text or both modes?" TEXT, "Remote Access: Web (HTTP)_ Telnet_ SSH_ RDP_ Serial COM RS232_ ..." TEXT, [Change rules without requiring restart?] TEXT, [Ability to centrally manage all firewalls together] TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html6' ([Features:] TEXT, [Modularity: supports third-party modules to extend functionality?] TEXT, [IPS : Intrusion prevention system] TEXT, [Open-Source License?] TEXT, [supports IPv6 ?] TEXT, [Class: Home / Professional] TEXT, [Operating Systems on which it runs?] TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html7' ([Can:] TEXT, "NAT44 (static_ dynamic w/o ports_ PAT)" TEXT, "NAT64_ NPTv6" TEXT, [IDS (Intrusion Detection System)] TEXT, [VPN (Virtual Private Network)] TEXT, [AV  (Anti-Virus)] TEXT, Sniffer TEXT, [Profile selection] TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html8' ([vteFirewall software] TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html9' (A TEXT, B TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html10' (A TEXT, B TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html11' (A TEXT, B TEXT);

The attributes within the converted SQLite database may include symbols as the above.
Symbols within attributes can be replaced by using --replace-symbol option.
In the following example shows replace symbols to underscores.

:Example:
.. code-block:: console

    $ sqlitebiter --replace-symbol _ -q url "https://en.wikipedia.org/wiki/Comparison_of_firewalls"

:Output:
.. code-block:: sql

    $ sqlite3 out.sqlite .schema
    CREATE TABLE IF NOT EXISTS '_source_info_' ("source_id" INTEGER NOT NULL, "dir_name" TEXT, "base_name" TEXT NOT NULL, "format_name" TEXT NOT NULL, "dst_table" TEXT NOT NULL, size INTEGER, mtime INTEGER);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html1' (Firewall TEXT, License TEXT, "Cost_and_usage_limits" TEXT, OS TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html2' (Firewall TEXT, License TEXT, Cost TEXT, OS TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html3' ("Can_Target" TEXT, "Changing_default_policy_to_accept_reject_by_issuing_a_single_rule" TEXT, "IP_destination_address_es" TEXT, "IP_source_address_es" TEXT, "TCP_UDP_destination_port_s" TEXT, "TCP_UDP_source_port_s" TEXT, "Ethernet_MAC_destination_address" TEXT, "Ethernet_MAC_source_address" TEXT, "Inbound_firewall_ingress" TEXT, "Outbound_firewall_egress" TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html4' (Can TEXT, "work_at_OSI_Layer_4_stateful_firewall" TEXT, "work_at_OSI_Layer_7_application_inspection" TEXT, "Change_TTL_Transparent_to_traceroute" TEXT, "Configure_REJECT_with_answer" TEXT, "DMZ_de_militarized_zone_allows_for_single_several_hosts_not_to_be_firewalled" TEXT, "Filter_according_to_time_of_day" TEXT, "Redirect_TCP_UDP_ports_port_forwarding" TEXT, "Redirect_IP_addresses_forwarding" TEXT, "Filter_according_to_User_Authorization" TEXT, "Traffic_rate_limit_QoS" TEXT, Tarpit TEXT, Log TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html5' (Features TEXT, "Configuration_GUI_text_or_both_modes" TEXT, "Remote_Access_Web_HTTP_Telnet_SSH_RDP_Serial_COM_RS232" TEXT, "Change_rules_without_requiring_restart" TEXT, "Ability_to_centrally_manage_all_firewalls_together" TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html6' (Features TEXT, "Modularity_supports_third_party_modules_to_extend_functionality" TEXT, "IPS _Intrusion_prevention_system" TEXT, "Open_Source_License" TEXT, "supports_IPv6" TEXT, "Class_Home_Professional" TEXT, "Operating_Systems_on_which_it_runs" TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html7' (Can TEXT, "NAT44_static_dynamic_w_o_ports_PAT" TEXT, "NAT64_NPTv6" TEXT, "IDS_Intrusion_Detection_System" TEXT, "VPN_Virtual_Private_Network" TEXT, "AV_Anti_Virus" TEXT, Sniffer TEXT, "Profile_selection" TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html8' ("vteFirewall_software" TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html9' (A TEXT, B TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html10' (A TEXT, B TEXT);
    CREATE TABLE IF NOT EXISTS 'Comparison_of_firewalls_Wikipedia_html11' (A TEXT, B TEXT);

Command help

::

Usage: sqlitebiter [OPTIONS] COMMAND [ARGS]...

Options:
  --version                       Show the version and exit.
  -o, --output-path PATH          Output path of the SQLite database file.
                                  Defaults to 'out.sqlite'.
  -a, --append                    Append table(s) to existing database.
  --add-primary-key PRIMARY_KEY_NAME
                                  Add 'PRIMARY KEY AUTOINCREMENT' column with
                                  the specified name.
  --convert-config TEXT           [experimental]
                                  Configurations for data
                                  conversion. The option can be used only for
                                  url subcommand.
  -i, --index INDEX_ATTR          Comma separated attribute names to create
                                  indices.
  --no-type-inference             All of the columns assume as TEXT data type
                                  in creating tables.
  --type-hint-header              Use headers suffix as type hints.
                                  If there
                                  are type hints, converting columns by
                                  datatype corresponding with type hints.
                                  The
                                  following suffixes can be recognized as type
                                  hints (case insensitive):
                                  "text": TEXT
                                  datatype.
                                  "integer": INTEGER datatype.
                                  "real": REAL datatype.
  --replace-symbol TEXT           Replace symbols in attributes.
  -v, --verbose
  --debug                         For debug print.
  -q, --quiet                     Suppress execution log messages.
  -h, --help                      Show this message and exit.

Commands:
  completion  A helper command to setup command completion.
  configure   Configure the following application settings: (1) Default...
  file        Convert tabular data within CSV/Excel/HTML/JSON/Jupyter...
  gs          Convert a spreadsheet in Google Sheets to a SQLite database...
  url         Scrape tabular data from a URL and convert data to a SQLite...

For more information

More examples are available at 
https://sqlitebiter.rtfd.io/en/latest/pages/usage/index.html

Installation
============

Installation: pip (Python package manager)
----------------------------------------------------------
::

    pip install sqlitebiter


Installation: apt
----------------------------------------------------------------------------
You can install the package by ``apt`` via a Personal Package Archive (`PPA <https://launchpad.net/~thombashi/+archive/ubuntu/ppa>`__):

::

    sudo add-apt-repository ppa:thombashi/ppa
    sudo apt update
    sudo apt install sqlitebiter


Installation: dpkg (``.deb`` package)
----------------------------------------------------------------------------
The following commands will execute download the latest ``.deb`` package from the `release page <https://github.com/thombashi/sqlitebiter/releases>`__, and install it.

::

    curl -sL https://raw.githubusercontent.com/thombashi/sqlitebiter/master/scripts/installer.sh, sudo bash


Installation: Windows
----------------------------------------------------------
``sqlitebiter`` can be used in Windows environments without Python installation as follows:

#. Navigate to https://github.com/thombashi/sqlitebiter/releases
#. Download the latest version of the ``sqlitebiter_win_x64.zip``
#. Unzip the file
#. Execute ``sqlitebiter.exe`` in either Command Prompt or PowerShell


Installation: brew for macOS
----------------------------------------------------------
.. code:: console

    $ brew tap thombashi/sqlitebiter
    $ brew install sqlitebiter

- `Homebrew Formula <https://github.com/thombashi/homebrew-sqlitebiter>`__


Command Completion
----------------------------------------------------------
.. code:: console

    setup command completion for bash:

        sqlitebiter completion bash >> ~/.bashrc

    setup command completion for zsh:

        sqlitebiter completion zsh >> ~/.zshrc


Dependencies
============
Python 3.5+

Python package dependencies
------------------------------------------------------------

Mandatory dependencies

Following mandatory Python packages are automatically installed during
sqlitebiter installation process:

  • appconfigpy <https://github.com/thombashi/appconfigpy>__
  • click <https://palletsprojects.com/p/click/>__
  • colorama <https://github.com/tartley/colorama>__
  • loguru <https://github.com/Delgan/loguru>__
  • msgfy <https://github.com/thombashi/msgfy>__
  • nbformat <https://jupyter.org/>__
  • path <https://github.com/jaraco/path>__
  • pathvalidate <https://github.com/thombashi/pathvalidate>__
  • pytablereader <https://github.com/thombashi/pytablereader>__
  • retryrequests <https://github.com/thombashi/retryrequests>__
  • SimpleSQLite <https://github.com/thombashi/SimpleSQLite>__
  • typepy <https://github.com/thombashi/typepy>__

Google Sheets dependencies (Optional)

Extra Python packages are required to install to use Google Sheets feature (`gs` subcommand):

- `gspread <https://github.com/burnash/gspread>`_
- `oauth2client <https://github.com/google/oauth2client/>`_
- `pyOpenSSL <https://pyopenssl.readthedocs.io/en/stable/>`_

The extra packages can be installed with the following `pip` command;

.. code:: console

    $ pip install sqlitebiter[gs]

note: binary packages include these dependencies

Test dependencies
  • pytest <https://docs.pytest.org/en/latest/>__
  • responses <https://github.com/getsentry/responses>__
  • sqliteschema <https://github.com/thombashi/sqliteschema>__
  • tox <https://testrun.org/tox/latest/>__

Misc dependencies (Optional)

- `lxml <https://lxml.de/installation.html>`__
- `pypandoc <https://github.com/bebraw/pypandoc>`__
    - required when converting MediaWiki files


Dependencies other than Python packages (Optional)
------------------------------------------------------------
- ``libxml2`` (faster HTML/Markdown conversion)
- `pandoc <https://pandoc.org/>`__ (required when converting MediaWiki files)

Documentation
===============
https://sqlitebiter.rtfd.io/

Overview

Name With Ownerthombashi/sqlitebiter
Primary LanguagePython
Program languagePython (Language Count: 7)
Platform
License:MIT License
Release Count84
Last Release Namev0.36.3 (Posted on 2023-12-03 02:34:03)
First Release Namev0.1.0 (Posted on )
Created At2016-05-04 17:26:07
Pushed At2024-04-30 23:59:07
Last Commit At2024-05-01 08:59:03
Stargazers Count828
Watchers Count29
Fork Count51
Commits Count1.2k
Has Issues Enabled
Issues Count61
Issue Open Count12
Pull Requests Count43
Pull Requests Open Count0
Pull Requests Close Count1
Has Wiki Enabled
Is Archived
Is Fork
Is Locked
Is Mirror
Is Private
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